Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNWDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAKPPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVW---VHDNARWAEYLRPDELHLGFNFRLARTEFDA-----------AEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGGEIGLRR--AKAMAVVMLALPGVVFLYNGQELGLPD-----VDLPDEVLQDPTWE---RSGRTE----------RGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRERNEFDGDVDWLAAPDDALIFRRHGGGLVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV |
| 3GBD Chain:A ((4-472)) | -----------------------------KWWKEAVFYQVYPRSFKDTNGDGIGDINGIIEKLDYLKALGIDAIWINPHYDSPNTDNGYDIRDYRKIMKEYGTMEDFDRLISEMKKRNMRLMIDVVINHTSDQNEWFVKSKSS-KDNPYRGYYFWKDAKEGQA---PNNYPSFFGGSAW----QKDEKTNQYYLHYFAKQQPDLNWDNPKVRQDLYAMLRFWLDKGVSGLRFDTVATYSK---IPDFPNLTQQQLKNFAAEYT-KGPNIHRYVNEMNKEVLSHYDIATAGEIFGVPLDQSIKFFD-RRRDELNIAFTFDLIRLDRDSDQRWRRKDWKLSQFRQIIDN-VDRTAGEYGWNAFFLDNHDNPRAVSHFGDDRPQWREPSAKALATLTLTQRATPFIYQGSELGMTNYPFKAIDEFDDIEVKGFWHDYVETGKVKADEFLQNVRLTSRDNSRTPFQWDGSKNA-GF-TSGKPWFKVNPNYQEINAVSQVTQPDSVFNYYRQLIKIRHD------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108259 for 3708 contacts (-29.2/contact) +
2D Compatibility (PS) -48499 + (NN) -44079 + (LL) 4188
1D Compatibility (HY) -30000 + (ID) 8050
Total energy: -234699.0 ( -63.30 by residue)
QMean score : 0.547
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