Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQ---LMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLA-DVQVAVSSLRQLDELLHAVRR--TGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGD---MGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR |
| 1BD0 Chain:A ((12-244)) | ---------------------------------------VDLDAIYDNVENLRRLLPD--DTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIE-APILVLGASRPADAALAAQQRIALTVFRSDWLEEASALY--SGPF-PIHFHLKMDTGMGRLGVKDEEETKRIVALIE--RHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPS---RPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125932 for 1870 contacts (-67.3/contact) +
2D Compatibility (PS) -24492 + (NN) -10386 + (LL) 10316
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -170244.0 ( -91.04 by residue)
QMean score : 0.365
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