Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGH-PGIVA------PPAMIQVWTMMGLGG----VRPKDDPLGPI----IKLFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELGDVVGPKQTALGEGWFINQHIVWQVG---DEDVAEMNW--RILKFKPAGSPSSVPDDLDPDAMMRPSSSRDTAFFWDG-------VKAHELRIQRLADGSLRHPPVPAVWQDKSV---------PINYVVSSGRG----TVFSFVVH--------HAPKVPGRTVPFVIALVE--LEEGVRMLGELRGADPARVAIGMPVRATYIDFPDWSLYAWEPDE--------------------- |
4IC4 Chain:A ((625-996)) | KSVTRRNDIPEA----AASPPSLLSFLRKNVGKDL-SSIAMPVTSNEPISILQLISETFEYAPLLTKATQRPDPITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEH--LDWECSYTVTPSQKFWGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVN---EFEVHSSKGDKSHILFDKAGMFSGRSEGFKVSIIPPPSSNRKKETLAGKWTQSLANETTHETIWEVGDLVSNPKKKYGFTKFTANLNEITEIEKGNLPPTDSRLRPDIRAYEEGNVDKAEEWKLKLEQLQRERRNKGQDVEPKY--FEKVSKNEWKYITGPKSYWERRKKHDWSDISQLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76245 for 2217 contacts (-34.4/contact) +
2D Compatibility (PS) -30995 + (NN) -1712 + (LL) 1116
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -120136.0 ( -54.19 by residue)
QMean score : 0.130
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