Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSPAPVQ------------VMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVA-AGVDPARLVLDPGLGFAK-TAQHNWAILHALPELV-----ATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG
2Y5S Chain:A ((8-292))--PAPLQCGRFELTFERPLVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVR-DFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGG-----KPPLERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAAAR-----


General information:
TITO was launched using:
RESULT:

Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160502 for 2169 contacts (-74.0/contact) +
2D Compatibility (PS) -28717 + (NN) -25471 + (LL) 544
1D Compatibility (HY) -17200 + (ID) 5450
Total energy: -236796.0 ( -109.17 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_2Y5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y5S-query.scw
PDB file : Tito_Scwrl_2Y5S.pdb: