Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLSIKKNLGLLAMTAALAACASNPNDLPDFP-EHEYAATQQVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLTR-
2QUO Chain:A ((4-126))
KEILDLAAATERLNLTDALNS--NPAGNLYDWRSSNSYPWTQK-----LNLHLTITA------TGQKYRILASKIVDF-NIYSNNFNNL------------------VKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSS-------------------YSGNYPYSILFQKF
General information:
TITO was launched using:
RESULT:
Template:
2QUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18615 for 804 contacts (-23.2/contact) +
2D Compatibility (PS) -12550 + (NN) -3810 + (LL) 2332
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -41093.0 ( -51.11 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_2QUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QUO-query.scw
PDB file :
Tito_Scwrl_2QUO.pdb
: