Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
3Q62 Chain:B ((7-172))
--KRESYTKEDLEASGRGELFGAGGPPLPAGNMLMMDRIVKMIEDGGSHNKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPDAKKVTYRINFKRVIMRKLIMGVADGEVLVDGKVIYTATDLKVGLFKDT---
General information:
TITO was launched using:
RESULT:
Template:
3Q62.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126687 for 1311 contacts (-96.6/contact) +
2D Compatibility (PS) -17350 + (NN) -7892 + (LL) 288
1D Compatibility (HY) -20000 + (ID) 5550
Total energy: -177191.0 ( -135.16 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3Q62.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q62-query.scw
PDB file :
Tito_Scwrl_3Q62.pdb
: