Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELFKEFTFESAHRLPHVP--------EGHKCGR--LHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKP-IYEQLDHNYLNDI-PGL--ENPTSENLCRWIWQQLKPLLP--ELSKVRVHETCTSGCEYRGD
1B66 Chain:A ((7-140))
ARLSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKEYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGALYKVKVYETDNNIVVYKGE
General information:
TITO was launched using:
RESULT:
Template:
1B66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66582 for 828 contacts (-80.4/contact) +
2D Compatibility (PS) -12591 + (NN) -3807 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2100
Total energy: -95080.0 ( -114.83 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1B66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B66-query.scw
PDB file :
Tito_Scwrl_1B66.pdb
: