Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLCGCIRGKPMTQETVGFAALGIHPNVLAAIVAVGYEEPSPIQAQSIPLIL--EGHDMIGQAQTGTGKTAAFALPLLSRIDPSRREPQMLV----LVPTRELALQVATACETYSKQLPGV---GVVAVYGGAPMGPQLKALRQ-GAQILVATPGRLCDHLRR-DEKLLATVQRLVLDEADEMLKLGFMDDLEVIFEALPESR-------QTVLFSATLPASIRGIAERHLKQPK--HVKIAAKTQTVA--RIEQVHLMVHADQKAGSI--------QRLLEVEQFDALIAFVRTKQATLDYAELLERQGYR---AAALNGDMPQAQRERVIESLKDGSLDIVIATDVAARGLDVPRITHVLNIDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQKVGEVRLPDAETVLEARLARLAASLTPLLDSAVEQRGAVRDELCRRLGCDAETLAAALLARLTAGKALDLESVRREQPLTPSAPRERADRGERGERPERSGERRPMAPPSEGRARCRTALGARDGVAAKNLLGAILNEGGLSREDIGRIQIRDTFSLIELPEANLERLLTKLKDTRVAGKALRLRRYRED |
3SQX Chain:A ((45-399)) | ----------------------------------------TPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQS--VVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166407 for 2586 contacts (-64.3/contact) +
2D Compatibility (PS) -34547 + (NN) -11327 + (LL) 17424
1D Compatibility (HY) -27200 + (ID) 5600
Total energy: -227657.0 ( -88.03 by residue)
QMean score : 0.477
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