Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
2VUD Chain:A ((1-114))-ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG


General information:
TITO was launched using:
RESULT:

Template: 2VUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44981 for 834 contacts (-53.9/contact) +
2D Compatibility (PS) -13114 + (NN) -12474 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5700
Total energy: -90061.0 ( -107.99 by residue)
QMean score : 0.736

(partial model without unconserved sides chains):
PDB file : Tito_2VUD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VUD-query.scw
PDB file : Tito_Scwrl_2VUD.pdb: