Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP---QEHAVCL------EMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN |
4GP2 Chain:A ((35-249)) | --------------------------------EAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQA---RWREVTLDDYI--KMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWN-FGMAAGVAFQIIDDVLDIYGDPKKFGKEIGKDIKEHK------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32816 for 1526 contacts (-21.5/contact) +
2D Compatibility (PS) -22928 + (NN) -20119 + (LL) 7744
1D Compatibility (HY) -11600 + (ID) 4300
Total energy: -84019.0 ( -55.06 by residue)
QMean score : 0.315
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