Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRTDLDPVVEIPARAENVGETTMSTTLVKGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLQEQEAAKKFIRIKREVSVEEGDKRAVFVPFDGFKVSFEIDFDHPVFRGRTQQASVDFSSTSFVKEVSRARTFGFMRDIEYLRSQNLALGGSVENAIVVDENRVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFRGFKSGHALNNQLLRTLIADKDAWEVVTFEDARTAPISYMRPAAAV |
1P42 Chain:A ((1-267)) | -GLEKTVKEKLSFEGVGIHTGEYSKLIIHPEKEGTGIRFFKNG----VYIPARHEFVVHTNHSTDLGFKGQRIKTVEHILSVLHLLEITNVTIEVIGNEIPILDGSGWEFYEAIRKNILNQNRE-IDYFVVEEPIIVEDEGRLIKAEPSDTLEVTYEGEFKNFL---GRQKFTFV---EGNEEEIVLARTFAFDWEIEHIKKVGLGKGGSLKNTLVLGKDKVYNPEGLRYENEPVRHKVFDLIGDLYLLGSPVKGKFYSFRGGHSLNVKLVKELAKKQK------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128416 for 2317 contacts (-55.4/contact) +
2D Compatibility (PS) -28076 + (NN) -4752 + (LL) 3000
1D Compatibility (HY) -17600 + (ID) 4750
Total energy: -180594.0 ( -77.94 by residue)
QMean score : 0.491
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