Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLDIKNLSVRFGDTTAVPVV-DGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLKGRQRRRIVG---KDMAMVFQ---DPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
| 2FGK Chain:D ((7-239)) | ----DITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKS-TLTKLIQRFYIP---ENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANP----GMSVEKVI---YAAKLAGAHDFISELRE-----GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGR--TVIIIAHRLSTV-KNADRIIVMEKGKIVEQGKHKELLSEPESLYS--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140679 for 1712 contacts (-82.2/contact) +
2D Compatibility (PS) -23964 + (NN) -6932 + (LL) 7048
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -181677.0 ( -106.12 by residue)
QMean score : 0.397
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