Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRPLVAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAE-NAEVAKGVRLLYGGSVKAASAAELFGMPDIDGGLVGGASLNADEFGAICRAAGS
4HHP Chain:A ((6-249))
--QPIAAANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAITR--SGAFTGEVSLQILKDYGISWVVLGHSERRLYYGDTNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLK-PEFVEIIEA---
General information:
TITO was launched using:
RESULT:
Template:
4HHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148178 for 2020 contacts (-73.4/contact) +
2D Compatibility (PS) -26830 + (NN) -11515 + (LL) 464
1D Compatibility (HY) -21600 + (ID) 5450
Total energy: -213109.0 ( -105.50 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_4HHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HHP-query.scw
PDB file :
Tito_Scwrl_4HHP.pdb
: