Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLNWAILGPGSIAHEFAEGMRGM-NREIYAVGARSLEKGQAFASQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKE--KDPKNRFYNM-DLAGGALLDIGTYALSFARYFLSETPDEVLTTMKK--FETGVDEQSGILLKNNEEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPR---ASR-----ATVTHTA---TGKV---EEIE-VGETSKALEYEITAMEESVATG-EN-MTYQLTNDVIAIMSDVRTQWGIKFPFEK |
| 3DB2 Chain:A ((3-348)) | YNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNC-AGDATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEVSSIEAVFSNERGLELKKGNWRGEPATAPGGPLTQLGVHQIDNLQFLLGPV-ARVFNFGKPMYTEVENITVNQTLLEFEDGKQAYLGTNWACPGVFSINVYGTKANLFYQLDFSWWSNSDVTDEHSTLIKREFAS---NRILRDVKVDFESVDHLRVEVEEVADVIRNGGETEIGAEASLRNLAVVLAAVKSVHEKRPVE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180811 for 2780 contacts (-65.0/contact) +
2D Compatibility (PS) -33870 + (NN) -4704 + (LL) -28
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -232713.0 ( -83.71 by residue)
QMean score : 0.556
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