Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNIILAMVCALIGLIIGYVAISMKMKSSKEAAELTLLNAEQDAVDLRGKAEIEAEHIRKAAERESKAHQKELLLEAKEEARKYREEIEKEFKSDRQELKQMEARLTDRASSLDRKDENLSNKEKMLDSKEQSLTDKSRHINEREQEIATLETKKVEELSRIAELSQEEAKDIILADTEKDLAHDIATRIKEAEREVKDRSNKIAKDLLAQAMQRLAGEYVTEQTITTVHLPDDNMKGRIIGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLIQDGRIHPARIEELVEKNRLEMDQRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGKLAGILAGEL------GENV---DLARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKE---HP----IVVNTIASHHGDVEP-------------DSVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIANGFEGVQNAFALQAGREIRIMVQPGKVSDDQVVIMSHKVREKIEQNLDYPGNIKVTVIREMRAVDFAK |
| 3RF0 Chain:A ((17-142)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNIDREQARRVLETTEQLYTQWLAQNTKLVQPQLEALLKWAAMLHEVGLSINH---SGMHRHSAYILQNTNLPGFNQEQQTLLATLVRMHRKAIKLDELPRLNLFKKKYYLPLIQLLRLSTLLNNQRQSTTTPESLRLITDDSHWTLRFPHGYLTQNSLVQLDFEREQAYWDDVVGWKLVIEEEEPD------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29399 for 655 contacts (-44.9/contact) +
2D Compatibility (PS) -10659 + (NN) -8678 + (LL) 32312
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -18574.0 ( -28.36 by residue)
QMean score : 0.370
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