Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKAVHHIAIIVSDYEKSKDFYVNKLGFEIIRENHRPER-----HDYKLD-LRC-GDIELEIFGNRLDDPEYETPPQRIGRPNWPREACGLRHLAFYVPD--VEAYKIELENLGIFVEPIRYDDYTGKKMTFFFDPDGLPLELHE
3KOL Chain:A ((16-150))
-NLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE--------LS-PPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVT-R-TGRGVYFYDPDGFMIEIRC
General information:
TITO was launched using:
RESULT:
Template:
3KOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56945 for 792 contacts (-71.9/contact) +
2D Compatibility (PS) -13432 + (NN) -6510 + (LL) 204
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -82633.0 ( -104.33 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_3KOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KOL-query.scw
PDB file :
Tito_Scwrl_3KOL.pdb
: