Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNTKTLLPYKTMPVWTAQSIPKAFLEKHNTKEGTWAKLTILSGSLVFYQLSPDGEEISRHIFDASSDIPFVDPQVWHKVSPNSPDLSCYLTFYCQKEDYFHKKYG---LTRTHSEVIASAPLLSEKSNILDLGCGQGRNSLYLSLLGHQVTSVDSNGQSLVALENMALEEELPYNIKRYDINTAAI-EGHYDFILSTVVFIF-LNPDCISDIILQMQ-SHTQIGGYNL-IVSAMDTAEN-PCPLPFPFTFKEGQLKSYYNDWEIIKYNENLGELHRVDENGNRLKLQFATLLARKLRS |
3H2B Chain:A ((2-196)) | --------------------------------------------------------------------------------------TDDVSKAYSSPTFDAEALLGTVISAEDPDRVLIEPWATGVDGVILDVGSGTGRWTGHLASLGHQIEGLEPA----TRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE-LPDALVALRMAVEDGGGL-LMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP-----------RFPHAYLTAEASL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85541 for 1493 contacts (-57.3/contact) +
2D Compatibility (PS) -19430 + (NN) -326 + (LL) 5416
1D Compatibility (HY) -1200 + (ID) 1500
Total energy: -102581.0 ( -68.71 by residue)
QMean score : 0.277
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