Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNTKTLLPYKTMPVWTAQSIPKAFLEKHNTKEGTWAKLTILSGSLVFYQLSPDGEEISRHIFDASSDIPFVDPQVWHKVSPNSPDLSCYLTFYCQKEDYFHKKYG---LTRTHSEVIASAPLLSEKSNILDLGCGQGRNSLYLSLLGHQVTSVDSNGQSLVALENMALEEELPYNIKRYDINTAAI-EGHYDFILSTVVFIF-LNPDCISDIILQMQ-SHTQIGGYNL-IVSAMDTAEN-PCPLPFPFTFKEGQLKSYYNDWEIIKYNENLGELHRVDENGNRLKLQFATLLARKLRS
3H2B Chain:A ((2-196))--------------------------------------------------------------------------------------TDDVSKAYSSPTFDAEALLGTVISAEDPDRVLIEPWATGVDGVILDVGSGTGRWTGHLASLGHQIEGLEPA----TRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE-LPDALVALRMAVEDGGGL-LMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP-----------RFPHAYLTAEASL-


General information:
TITO was launched using:
RESULT:

Template: 3H2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85541 for 1493 contacts (-57.3/contact) +
2D Compatibility (PS) -19430 + (NN) -326 + (LL) 5416
1D Compatibility (HY) -1200 + (ID) 1500
Total energy: -102581.0 ( -68.71 by residue)
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_3H2B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H2B-query.scw
PDB file : Tito_Scwrl_3H2B.pdb: