Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTIKKVLSVTGIILVTVASLAACSSKSHTTKTGKKEVNFATVGTTAPFSYVKDGK-LTGFDIEVAKAVFKGSDNYKVTFKKTE-WSSVFTGID-SGKFQMGGNNISYSSERSQKYLFSYP-IGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTN---ENITQILTNLSDGKADFKLFDGLTVNAIIKNQGLTNLKTIPLTMRDQPYIYFIFGQDQKDLQKYVNNCLKQLRKDGTLSKIAKEYLGGDYVPNEKDLVTPKEK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4P0G Chain:A ((7-435)) | APTALERVQKEGVLRVITRN--------------------------SPATYFQDRNGETGFEYELAKRFAERL-GVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPE----LKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMN--QVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96771 for 1987 contacts (-48.7/contact) +
2D Compatibility (PS) -26741 + (NN) -13308 + (LL) 1604
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -148016.0 ( -74.49 by residue)
QMean score : 0.392
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