Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKSKIAKFQKQQKLVEQYAELRRELKEKGDYEALRKLPKDSNPNRLKNRDLIDGRPHAYMRKFGMSRINFRNLAYKGQIPGIKKASW
2VQE Chain:N ((19-61))
----------------------------------------------RAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW
General information:
TITO was launched using:
RESULT:
Template:
2VQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12375 for 235 contacts (-52.7/contact) +
2D Compatibility (PS) -4471 + (NN) -1922 + (LL) 3496
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -19522.0 ( -83.07 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_2VQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VQE-query.scw
PDB file :
Tito_Scwrl_2VQE.pdb
: