Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTWNELTVHVNREAEEAVSNLLIETGSQGVAISDSADYLGQEDRFGELYPEVEQSDMIAITAYYPDTLDIEAVKADLADRLANFEGFGLATGSVNLDSQELVEEDWADNWKKYYEPARITHDLTIVPSWTDYEAKAGEKIIKMDPGMAFGTGTHPTTKMSLFALEQVLRGGETVIDVGTGSGVLSIASSLLGAKDIYAYDLDDVAVRVAQENIDMNPGTENIHVAAGDLLKGVQQ-EVDVIVANILADILIHLTDDAYRLVKDEGYLIMSGIISEKWDMVRESAEKAGFFLETHMVQGEWNACVFKKTDDISGVIGG |
| 1UFK Chain:A ((1-254)) | ---MWVYRLKGTLEALDPILPGLFDGGARGLWEREG-----------------------EVWAFFPAPVDLPY----------------------EGVWEEVGDEDWLEAWRRDLKPALAP-PFVVLAPWHTWEGA--EIPLVIEPG------HHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNG--VRPRFLEGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152013 for 2011 contacts (-75.6/contact) +
2D Compatibility (PS) -26993 + (NN) -9173 + (LL) 3016
1D Compatibility (HY) -12800 + (ID) 3350
Total energy: -201313.0 ( -100.11 by residue)
QMean score : 0.579
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