Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLLACLALMIAGIATALFIGFHDHTGNKKIVYDDDQEGLQDQIVFKFSHVVAENTPKGLAANKFADLVNEKSGGKIKIEVFPNGSLYSDIEEIEALQNGDVQFIAPSTSKLGMLSPEWGVLDLPYAFTDYNAVKKGLNGSIGTQLFDSLKKNQLKGLAYWTNGFKQITTNQGPVKTPDDLKGQDLRIMQSDVIEDQFKLLGATPHQESFNSTFQLLENNVVDGEENTISNIYSKKFYNVQDYLTISSHGYLGYAVMTDEHFWKAQTPETRRILTEAMKETTEWNETYAEQMNKEQLEEIK----KNSAIHIYELSDKEKQEWMKRLDPVYRQYEPIFGRELIRELLELRKDS
4OVS Chain:A ((23-330))-----------------------------------------MAEYTIKVTHVVSPNTPKGKGADFFAKRVGELTNGKVEVIVFPNSQLYGDGEEMKALKLGNAHIAMPSFSKFTSLVPEMQLFDLPFIFRDKDHLYKVLDGEVGQILKDKVSKKGFVALDYWDAGFKHLSSNKKPILLPEDAAGQKFRIMSSHVLEAQFKAVGANPQVLPFSEVYSALQQGVVDGAENPLSNFYTKKFNEVQTDLTLSNHGYLGYLVIMSESFWKKFPKDLKPMVLQAMKEATEYERKEAALDDEDMLAKISEYAKASGNLKIHTLTPEQKAAWQKAMEAIYPQFYKTIGEDLIKKVQA-----


General information:
TITO was launched using:
RESULT:

Template: 4OVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1686 67494 40.03 222.75
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 40.03
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.176

(partial model without unconserved sides chains):
PDB file : Tito_4OVS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OVS-query.scw
PDB file : Tito_Scwrl_4OVS.pdb: