Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD-PDREATGRILREALAQQDAAAQD
3LB5 Chain:A ((28-161))
NNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIPRMEGIEL-----I---TPTEILEENAKKIRAAL---------
General information:
TITO was launched using:
RESULT:
Template:
3LB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78808 for 942 contacts (-83.7/contact) +
2D Compatibility (PS) -13666 + (NN) -5172 + (LL) 1468
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -106728.0 ( -113.30 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_3LB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LB5-query.scw
PDB file :
Tito_Scwrl_3LB5.pdb
: