Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEYMSTGSDNKEEIDLLIKHLNVSDVIDIMENLYASEEPAVYEPSLMTMCQDSNQNDERSKSLLLSGQEVPWLSSVRYGTVEDLLAFANHISNTAKHFYGQRPQESGILLNMVITPQNGRYQIDSDVLLIPWKLTYRNIGSDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFKPS-----DVEIQACFRHENIAELYGAVLWGETVHLFMEAGEGGSVLEKLES-CGPMREFE--IIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVL--VDFGLSVQMTEDVYFPKDLRGTEIYMSPEVI--LCRGHSTKADIYSLGATLIHMQTGTPPWVK-RYPRSA-YPSYLYIIHKQAPPLEDIADDCSPGMRELIEASLERNPNHRPRAADLLKHEAL--NPPREDQPRCQSLDSALLERKRLLSRKELELPENIADSSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG |
| 2CLQ Chain:A ((32-284)) | -------------------------------------------------------------------------------------------------------------------------------------------------KGTYGIVYAGRDLSNQVRIAIKEIPERDS---QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-----ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP------ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CLQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -94287 for 1822 contacts (-51.7/contact) +
2D Compatibility (PS) -23384 + (NN) -3846 + (LL) 13812
1D Compatibility (HY) -17200 + (ID) 4050
Total energy: -128955.0 ( -70.78 by residue)
QMean score : 0.444
|
|
|