Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESPASSQPASMPQSKGKSKRKKDLRISCMSKPPAPNPTPPRNLDSRTFITIGDRNFEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRKVLDKNMTIPEDILGEIAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGISGYLVDSVAKTMDAGCKPY-MAPERINPELNQ-KGYNVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLPA-DRFSPEFVDFTAQCLRKNPAERMSYLELMEHPFFTLHKTKKTDIAAFVKEILGEDS |
| 4USF Chain:B ((21-282)) | ------------------------------------------------------------------IGELGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDI-LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKN---------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN-PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAE---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4USF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121974 for 1946 contacts (-62.7/contact) +
2D Compatibility (PS) -26880 + (NN) -12699 + (LL) 3484
1D Compatibility (HY) -18400 + (ID) 4250
Total energy: -180719.0 ( -92.87 by residue)
QMean score : 0.505
|
|
|