Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMKQFLDFGS--VNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVY-PPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLPVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRSA
1GKZ Chain:A ((38-378))------------------------------------------------------VRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFP--PIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIE----DEKLVRYFLDKTLTSRLGIRMLATHHLALH-------EDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRING------HVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAPMH-----------GFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREE---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181863 for 2460 contacts (-73.9/contact) +
2D Compatibility (PS) -33177 + (NN) -12706 + (LL) 4560
1D Compatibility (HY) -18800 + (ID) 5200
Total energy: -247186.0 ( -100.48 by residue)
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_1GKZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GKZ-query.scw
PDB file : Tito_Scwrl_1GKZ.pdb: