Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGLLTSGRKPSGGGRCTGRGGWRGQWCLKPWMGGADPPTPTLSCLLLPVPPELPDHCYRMNSSPAGTPSPQPSRANGNINLGPSANPNAQPTDFDFLKVIGKG-NYGKVLLAK-RKSDGAFYAVKVLQKKSILKKKEQSHIMAERSVLLK-NVRHPFLVGLRYSFQTPE-KLYFVLDYVNGGELFFHLQR-ERRFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDCQ-GHVVLTDFGLCKEGVEPEDTTS--TFCGTPEYLAPEVLRKE---PYDRAVDWWCLGAVLYEMLHGL-PPFYSQDVSQMYENILHQPLQIPGGRTVA-----ACDLLQSLLHKDQRQRLGS-KADFLEIKNHVFFSPIN---WDDLYHKRLTPPFNPNVTGPADLKHFDPEFTQEAVSKSIGCTPDTVASSSGASSAFLGFSYAPEDDDILDC |
| 1CDK Chain:A ((8-350)) | ------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H-----------LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVSGKVRFPS-----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI--------NEKCG--KEFSEF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178872 for 2519 contacts (-71.0/contact) +
2D Compatibility (PS) -34644 + (NN) -16377 + (LL) 1144
1D Compatibility (HY) -26400 + (ID) 6400
Total energy: -261549.0 ( -103.83 by residue)
QMean score : 0.421
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