Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFGNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIRPDSLRGENKEKGIKGERVSYELKEERGRNGEGKKFAINLKLLED
3AQQ Chain:A ((62-130))
VYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE--YV--PV--------EGDEVTYKMCSI--KN--EKLQAVEVVITHL
General information:
TITO was launched using:
RESULT:
Template:
3AQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18058 for 451 contacts (-40.0/contact) +
2D Compatibility (PS) -7003 + (NN) 893 + (LL) -96
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -30214.0 ( -66.99 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3AQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AQQ-query.scw
PDB file :
Tito_Scwrl_3AQQ.pdb
: