Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ--------
1JH3 Chain:A ((1-99))
ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLE--------GRFTVIRRGKKKYYLIRYA
General information:
TITO was launched using:
RESULT:
Template:
1JH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5842 for 494 contacts (-11.8/contact) +
2D Compatibility (PS) -7376 + (NN) 1187 + (LL) 376
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -15105.0 ( -30.58 by residue)
QMean score : 0.159
(partial model without unconserved sides chains):
PDB file :
Tito_1JH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JH3-query.scw
PDB file :
Tito_Scwrl_1JH3.pdb
: