Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRA-LANFDIN
3RKL Chain:A ((2-81))
SKITINIKDNTIEYGHKEFVLSN---------------------------------LQEDIKNLAEIVYQLAKLIEKL-SQYEEEVDTELYNLLHEYAIYLAGATSMFIDSENK
General information:
TITO was launched using:
RESULT:
Template:
3RKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3527 for 448 contacts (-7.9/contact) +
2D Compatibility (PS) -8588 + (NN) -6433 + (LL) 1652
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -19996.0 ( -44.63 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3RKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RKL-query.scw
PDB file :
Tito_Scwrl_3RKL.pdb
: