Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------MTKRPKRILATIIIFLSLLFTIIYIDDIQ--KWFNQYTDKLTQNHKGQGHSKWEDFFRGSRITETFGKYQHSPFD--GKHYGIDFALPKGTPIKAPTNGKVTRIFNNELGGKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHFQ-RMKGGVGNAYAEDPKPFIEQLPDGERSLYDL------------- |
| 3SLU Chain:A ((8-371)) | GVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYRHLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTLRSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQVAAGDILAAEVVKGGTRHQAFYYRSDKGGNYYDEDGRVLQGFNI--------EPLVYTRISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANG-VETLYAHLSAFS-QAQGNVRGGEVIGFVGSTG-RSTGPHLHYEARINGQPVNPVS--VALPTPELTQADKAAFAAQKQKADALLARLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29654 for 1246 contacts (-23.8/contact) +
2D Compatibility (PS) -19067 + (NN) -4952 + (LL) 504
1D Compatibility (HY) -4000 + (ID) 2200
Total energy: -59369.0 ( -47.65 by residue)
QMean score : 0.375
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