Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVDGKIVSADVQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNE----HKPARSCVEVARLPKDVKVEIELVSKIKEL
3VCZ Chain:A ((27-152))
-KVLHTDSAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEVPADIAAQARQSLDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNEVYGNFFDEHNVAHYPARSCVEVARLPKDVGIEIEAIAVR---
General information:
TITO was launched using:
RESULT:
Template:
3VCZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32406 for 946 contacts (-34.3/contact) +
2D Compatibility (PS) -13407 + (NN) -6424 + (LL) 552
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -65985.0 ( -69.75 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_3VCZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VCZ-query.scw
PDB file :
Tito_Scwrl_3VCZ.pdb
: