Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
4P8R Chain:C ((10-339))-VIRVGINGFGRIGRVVFRAAQRRNDIEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYKG-EAIVSNASCTTNCLAPLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQK-DWRGGRGAAQNIIPSSTGAAKAVGKIIPSLNGKLTGMAFRVPTPNVSVVDLTVRLERP-ATYKQICDAIKAASEGELKGILGYVDEEIVSSDINGIPLTSVFDARAG--ISLND-NFVKLVSWYDNETGYSNKVLDLIAHITK---


General information:
TITO was launched using:
RESULT:

Template: 4P8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150015 for 2843 contacts (-52.8/contact) +
2D Compatibility (PS) -34529 + (NN) -6744 + (LL) 536
1D Compatibility (HY) -30000 + (ID) 8250
Total energy: -229002.0 ( -80.55 by residue)
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4P8R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P8R-query.scw
PDB file : Tito_Scwrl_4P8R.pdb: