Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
3L92 Chain:A ((6-161))
---TKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKL-
General information:
TITO was launched using:
RESULT:
Template:
3L92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102452 for 1212 contacts (-84.5/contact) +
2D Compatibility (PS) -16772 + (NN) -6404 + (LL) 420
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -143758.0 ( -118.61 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3L92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L92-query.scw
PDB file :
Tito_Scwrl_3L92.pdb
: