Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHF-------NIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDVL--FKPKYGYGKYFNPCIDCHANMFRNAFYKMLE--LDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQASGEKPQFLD--ELLLRPMSAKLLEP---TFMEKKGWVDREKLLDVSGRGRARQ-----LQMIKDYGLKYYEKPGGG----CLLTDIQVSNKIKNLKEY-REMVFEDGVIVKNGRYFVLPHNARLVVARNEEENHKLDIEHPLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA |
| 2DER Chain:A ((17-380)) | --AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY----VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVK-------------------ALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17750 for 2539 contacts (-7.0/contact) +
2D Compatibility (PS) -33643 + (NN) 1187 + (LL) 1800
1D Compatibility (HY) -7600 + (ID) 2500
Total energy: -58506.0 ( -23.04 by residue)
QMean score : 0.182
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