Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MFKRLRRLRSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEPLLKECEELVGLGIKAVLLFGI--PKHKDATGSHALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGIL-ENASVSNDKTLKILNLQGLILAESGVDILAPSNMMDGNVLSLRKALDKAGYFH-TPIMSYSTKFASSYYGPFRDVANSPPSFG--DRKSYQMDYANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDH-TLLPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLLQRN |
| 1B4K Chain:A ((10-335)) | YPY-TRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLD-GVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHT-NVRIMAYSAKYASAYYGPFRDAVGSASNLGKGNKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEFR-APTFVYQVSGEYAMHMGAIQNGWLAE-SVILESLTAFKRAGADGILTYFAKQAAEQLRR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209011 for 2699 contacts (-77.4/contact) +
2D Compatibility (PS) -34698 + (NN) -17192 + (LL) 348
1D Compatibility (HY) -22800 + (ID) 7150
Total energy: -290503.0 ( -107.63 by residue)
QMean score : 0.618
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