Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTP-EFKAMMEAVKK--------------------------QALVEFWAKKQAEEV--KKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
| 3RGC Chain:A ((21-271)) | -----------------------------------------NAIAVVVDKEPITTYDIDQTMKALK----------IDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSSYEQFRTNFKKDLEKRKLYE---KIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKN----T------KKT--ILKP-----------QN---ASLNTSNADPRLLGLLSQIPVGSFS-PVLNGKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28728 for 1457 contacts (-19.7/contact) +
2D Compatibility (PS) -23911 + (NN) -12946 + (LL) 4136
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -68449.0 ( -46.98 by residue)
QMean score : 0.485
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