Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKKEKPKMNVLLMGATGVGKSSLINALFGKEITKTGVGKPITQHLEK--YIDEEKGLILWDTKGIEDKDYHDTMQSIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRVQERERELLSFAKHWNIPTIVVFTHTQAEAGDAFVQETKGIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRHFLSIQRVKIQERKQAMIEECKTIIHVASGAAGVAGLIPIPFSDALAIAPIQAGMIYKMNDAFGMDLDKSVGASLVAGLLGVTAVAQVGRTLVNGFLKFIPVVGSVAGGATAAVITEGIGFAYLKVLEKCFNDETGEVNLPGEVGMITSLFKENYLNLDTIKKLKP |
3W5J Chain:A ((2-165)) | -------------------------------------------QFKRIALLGMPNTGKSTLFNRMTGGAARVGN-WPGITVELLSGKILLGADMVEIIDLPGIYDLHGFSDDEQVVRHF-------LHDNVPDLALVILNATQ---IERQMSLLLQLKQLNMNIVVLLNMSDEAKQYGITIDSR-KMSE-----LLQIPVFQLS-------------TGYQEALQAVTRALRYPTPGMAENVRTQLEQDEHIEAEMVRILKSAVQIP------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37602 for 1186 contacts (-31.7/contact) +
2D Compatibility (PS) -17115 + (NN) -3097 + (LL) 14684
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -53780.0 ( -45.35 by residue)
QMean score : 0.394
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