Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLE---SRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDE-ELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPTYLSLQENLNALLNTLFKGKT |
| 3LSN Chain:A ((4-292)) | -----TAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKP------EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASG-RAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATL----------PTYPALLGLAAAKEYALELRDQALHALRPFDAAAEPLRELARYIVE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LSN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180018 for 2353 contacts (-76.5/contact) +
2D Compatibility (PS) -29162 + (NN) -15090 + (LL) 788
1D Compatibility (HY) -12000 + (ID) 4900
Total energy: -240382.0 ( -102.16 by residue)
QMean score : 0.479
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