Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISHFEPVTVVASSSQYV-NA-RYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELER-----KDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRG-IYLDETNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPNDELAREKLQQLYPNCEVVGVKAREILLGGGNIHCITQQVPR |
| 1ZBR Chain:A ((3-337)) | -----------KRLFLPEWAPQEAVQLTWPHDRTDWAYMLDEVETCFVRIATAILRHERLIVVCPDRKRVFGLLPPELHHRLYCFELPSNDTWARDHGGISLLAD-GRPMIADFAFNGWGMKF-----AAHHDNLITRRLHA-LGLFAEGVTLDNRLAFVLEGGALETDGEGTLLTTDSCLFEPNRNAGLSRTAIIDTLKESLGVSRVLSLRHGALAGDDTDGHIDTLARFVDTRTIVYVRSEDPSDEHYSDLTAMEQELKELRRPDGQPYRLVPLPMAEALY------------------DGADRLPATYANFLIINGAVLVPTYDSHLDAVALSVMQGLFPDREVIGIDCRPLVKQHGSLHCVTMQYPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 69975 for 2737 contacts (25.6/contact) +
2D Compatibility (PS) -32806 + (NN) 1767 + (LL) 1580
1D Compatibility (HY) 8800 + (ID) 1100
Total energy: 48216.0 ( 17.62 by residue)
QMean score : 0.051
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