Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEKERFRTELIGEKIGQLCKTYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYL-SSIMDLYNGEIVAYSIGEKQTQN
1ZGC Chain:B ((91-142))
-------------------------------------------------------------------------SEDCLYLNIWVPSPRPKSTTVMVWIYGGG--FYSGSSTLDVYNGKYLAYT--------
General information:
TITO was launched using:
RESULT:
Template:
1ZGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1941 for 177 contacts (-11.0/contact) +
2D Compatibility (PS) -4968 + (NN) 358 + (LL) 6988
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -4063.0 ( -22.95 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_1ZGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZGC-query.scw
PDB file :
Tito_Scwrl_1ZGC.pdb
: