Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKWKRDHLGMVM-GILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQ--------YDNF------LEDVK----KDLLESI-----AIAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVL---------GTTPGDRMEGTGATTVYGFS--KGCTITRVHDV------LPIARMVRMTDAITGKLDITNL |
| 2VEG Chain:A ((7-303)) | -------HAKTVICGIINVTP---------FALEQALQQARKLIAEGASMLDIGGE-----SSYVEIEEEIQRVVPVIKAIR-KESDVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFAFTELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVHDVASHRMAVEIASAIRLAD----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VEG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127501 for 1921 contacts (-66.4/contact) +
2D Compatibility (PS) -26494 + (NN) -16550 + (LL) 892
1D Compatibility (HY) -20400 + (ID) 4750
Total energy: -194803.0 ( -101.41 by residue)
QMean score : 0.430
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