Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAE-----CTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKT--KGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
3ETN Chain:A ((25-210))
-------------QELLQKEAQAVLNIPVTDAYEKAVELIVEQIHRKKG-KLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEVCTLGMTPTTSTTVMTVIGDILVVQTMKRTEFTIEEYSKRHHGGYL-------
General information:
TITO was launched using:
RESULT:
Template:
3ETN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118083 for 1422 contacts (-83.0/contact) +
2D Compatibility (PS) -19224 + (NN) -10860 + (LL) 1044
1D Compatibility (HY) -6400 + (ID) 2950
Total energy: -156473.0 ( -110.04 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3ETN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ETN-query.scw
PDB file :
Tito_Scwrl_3ETN.pdb
: