Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFV----IGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNF--IVSDFDRAAPNGT-GAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFFGITKDDKFVTPYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDEFKEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 1I1K Chain:C ((5-308)) | -------------------KADYIWFNGEM---VRWEDAKVHVM--SHALHYGTSVFEGIRCYDSHKGPV-VFRHREHMQRLHDSAK---IYRFPVSQSIDELMEACRD----VIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAF--PW-------ALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALD--VNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITP---VRSVDGIQV--GEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104235 for 2344 contacts (-44.5/contact) +
2D Compatibility (PS) -30809 + (NN) -9937 + (LL) 1072
1D Compatibility (HY) -16000 + (ID) 4950
Total energy: -164859.0 ( -70.33 by residue)
QMean score : 0.311
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