Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----VKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLL-DATDEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLGK
2JFV Chain:A ((19-288))
MIRLTDNRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVAKKIVAETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQFYTTGSAKLFEEIAEDWLGIGHLNVEHIEL--
General information:
TITO was launched using:
RESULT:
Template:
2JFV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -217118 for 2344 contacts (-92.6/contact) +
2D Compatibility (PS) -28079 + (NN) -6711 + (LL) -108
1D Compatibility (HY) -32800 + (ID) 8150
Total energy: -292966.0 ( -124.99 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2JFV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JFV-query.scw
PDB file :
Tito_Scwrl_2JFV.pdb
: