Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VHNPNLFNTLKQNEYTLPKDPNTSNEIIDTMLSYLSSTDSELRDNIAYNIFSEWLVVQDNLTTEQKMRIYNYAVNKNNLLFKINIIDSDAVFQRSFLALIIALLLEN-----NKVHNFLTDSEIRETLNLLIELLKNEKNTHSFIEEKGWAHCIAHTADALDELIYQRTISEIDVKKIMTTIAFFYKTNTKMLTGEEDERLSNILITALFEQKISNEEVKNWLISISETIPSYLPEIPLINIKQFTQTLLIKLTVLNYDVDFSLFPIVTRYIRKNDDNSTNKKAL |
2FOK Chain:A ((287-386)) | -------------------------------------------------------------------------VPKRVYWEMLATNLTDKEYVRTRRALILEILIKAGSLKIEQIQDNLKKLGFDEVIETIENDIKGLINTGIFIEIKGRFYQLKD--HILQFVIPNRLV------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35718 for 571 contacts (-62.6/contact) +
2D Compatibility (PS) -9187 + (NN) -1457 + (LL) 13960
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -37852.0 ( -66.29 by residue)
QMean score : 0.344
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