Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTT--YGNEVVQQLTFKKILEDKY-----TVTEKEVNAEYKKYEEQYGD---SFESTLSSNNLTKTSFKENLEYNLLVQKATE-----ANMDVSESKLKAYYKTWEP------DITVRHILVDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEK--GTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN |
| 3RGC Chain:A ((22-271)) | ------------------------AIAVVVDKEPITTYDIDQTMKALKIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKS---SYEQFRTNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK------TILKP---------QN---ASLNTSNADPRLLGLLSQIP-VGSFSPVLNGKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQ-NFIQDYFDKLRSKINIEYLR----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2456 for 1414 contacts (1.7/contact) +
2D Compatibility (PS) -24489 + (NN) -11791 + (LL) 3500
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -40924.0 ( -28.94 by residue)
QMean score : 0.569
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