Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNRLAVEIPGLSLKNPIMPASGCF-GFGQEYSKYYDLNELGAIMAKAVT--PEPRLGNPTPRVAETAS-GMLNAIGLQNPGLEHVLAHELPFLEQFE--TPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVK--HGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNV-ADIVSIAQAIEAAGADGLTMINTLLG-MRIDLKTRKPIIANG-TGGLSGPAIKPVAIRMIHQVRAV-SNIPIIGMGGVQTVDDVLEFLIAGADAVAV-GTMNFTDPFICPKLISELPKRMDALGISSLQDLKKERTNQ-- |
| 1EP3 Chain:A ((1-311)) | MTENNRLSVKLPGLDLKNPIIPASG-CFGFGEEYAKYYDLNKLGSIMVKATTLH--PRFGNPTPRVAETA-SGMLNAIGLQNPGLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG--GQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVT-DIVPIAKAVEAAGADGLTMINTLM-GVRFDLKTRQPILAN-ITGGLSGPAIKPVALKLIHQVAQDVD-IPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA-DPFVCPKIIDKLPELMDQYRIESLESLIQEVKEGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222909 for 2605 contacts (-85.6/contact) +
2D Compatibility (PS) -31321 + (NN) -11761 + (LL) -364
1D Compatibility (HY) -35600 + (ID) 10150
Total energy: -312105.0 ( -119.81 by residue)
QMean score : 0.534
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