Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIE-PDEIVFGLEINANHLASKQAGLVTATAEAIHIGKSTQVWEIKITDETEKLLCISRCTIAVKKKRK
1Q4T Chain:A ((28-151))
QTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATVAVVHEKGMMAVGQSNHTSFFRPVKEGHVRAEAVRIHAGSTTWFWDVSLRDDAGRLCAVSSMSIAVRPRRD
General information:
TITO was launched using:
RESULT:
Template:
1Q4T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78230 for 946 contacts (-82.7/contact) +
2D Compatibility (PS) -12745 + (NN) 2158 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -96917.0 ( -102.45 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1Q4T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q4T-query.scw
PDB file :
Tito_Scwrl_1Q4T.pdb
: