Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWKDGEH-QEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEENLKLYNKLINSEVV
3Q6Z Chain:A ((38-213))
-VLIVQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISKAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFKK-HCLKEIYLVDVSEKTVEAFAEAVKTVF-
General information:
TITO was launched using:
RESULT:
Template:
3Q6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136824 for 1486 contacts (-92.1/contact) +
2D Compatibility (PS) -19370 + (NN) -15251 + (LL) 324
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -184321.0 ( -124.04 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_3Q6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q6Z-query.scw
PDB file :
Tito_Scwrl_3Q6Z.pdb
: