Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADY-AGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
4RHY Chain:B ((21-200))
----DIKSVLLTAEQIQARIAELGEQIGNDYR-GQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG------GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY--
General information:
TITO was launched using:
RESULT:
Template:
4RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123618 for 1292 contacts (-95.7/contact) +
2D Compatibility (PS) -18412 + (NN) -6454 + (LL) 292
1D Compatibility (HY) -19600 + (ID) 3800
Total energy: -171592.0 ( -132.81 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_4RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHY-query.scw
PDB file :
Tito_Scwrl_4RHY.pdb
: